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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000233.1_261906_263181_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

261906 - 263181

Intron Length:

1276

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGGAAT

5'SS Class:

strong_major

3'SS Sequence:

CTGCTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

TGATTGTCAATC

Flanking Amino Acid:

VKTIWQQKAKEVLSAIMLIK

Intron Amino Acid Position:

690

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

81.5

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

81.7

0.71

0.8

76.6

Minor 5ss

35.6

-1.6

3.3

48.9

41.5

Minor BPS

46.9

-0.2

2.2

59.76

39.6

Associated Gene:

Gene:

URB2

Ensembl Gene ID:

ENSAPLG00000002998

Chromosome:

PEDO01000233.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003037

253877 - 274448

20572