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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000233.1_274275_278353_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

274275 - 278353

Intron Length:

4079

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCCTG

5'SS Class:

major

3'SS Sequence:

TTTCGTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

AACTCCTTAAAT

Flanking Amino Acid:

TAEEMAANLTVQSESGCANV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.1

65.5

45.9

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

89.1

0.88

0.7

84.2

30.7

Minor 5ss

41.6

-0.9

3.1

56.4

47.8

Minor BPS

74.2

0.84

1.3

81.26

39.8

Associated Gene:

Gene:

TAF5L

Ensembl Gene ID:

ENSAPLG00000003269

Chromosome:

PEDO01000233.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031122

273269 - 286952

13684

ENSAPLT00000024456

274130 - 286999

12870

ENSAPLT00000003331

274133 - 304035

29903