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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000233.1_280829_286154_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

280829 - 286154

Intron Length:

5326

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCTGGATA

5'SS Class:

major

3'SS Sequence:

CCTCCCCGACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCCT

U12 Branch Point Sequence:

TCCTCCCCGACC

Flanking Amino Acid:

RLACDILDEEEEEDDSAGTE

Intron Amino Acid Position:

325

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.46

1.3

71.4

40.1

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

62.2

0.28

54.6

35.1

Minor 5ss

37.3

-1.4

3.1

48.6

47.2

Minor BPS

49.3

-0

1.9

62.87

42.9

Associated Gene:

Gene:

TAF5L

Ensembl Gene ID:

ENSAPLG00000003269

Chromosome:

PEDO01000233.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031122

273269 - 286952

13684

ENSAPLT00000024456

274130 - 286999

12870

ENSAPLT00000003331

274133 - 304035

29903