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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000233.1_286848_286978_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

286848 - 286978

Intron Length:

131

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTTGGTGTA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

GGAACATTAATC

Flanking Amino Acid:

APADGSSSELGSGWVW*

Intron Amino Acid Position:

556

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.4

0.41

1.2

66.2

39.4

Major BPS

80.4

0.76

80.3

31.8

Major PPT

91.3

0.93

0.5

92.5

17.5

Minor 5ss

31.4

-2.1

3.3

37.9

41.4

Minor BPS

53.2

0.08

1.6

59.47

38.7

Associated Gene:

Gene:

TAF5L

Ensembl Gene ID:

ENSAPLG00000003269

Chromosome:

PEDO01000233.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024456

274130 - 286999

12870