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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000233.1_44896_51848_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44896 - 51848

Intron Length:

6953

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGTATG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCACATGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

GTTTTTTCCACA

Flanking Amino Acid:

LNLFEEFEKQAIYCCGLLST

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

79.6

35.4

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

76.8

0.6

0.9

33.8

Minor 5ss

-1.1

2.7

50.1

46.4

Minor BPS

49.8

-0

1.9

67.57

39.2

Associated Gene:

Gene:

PGBD5

Ensembl Gene ID:

ENSAPLG00000001338

Chromosome:

PEDO01000233.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001358

25497 - 59538

34042