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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000233.1_52047_57572_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52047 - 57572

Intron Length:

5526

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TTAATTTATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATGTTTTTAATT

Flanking Amino Acid:

LTNAYSPVQQGVIIKRKSGE

Intron Amino Acid Position:

327

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.9

81.8

38.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.5

0.64

40.4

Minor 5ss

41.1

-1

2.9

57.9

46.4

Minor BPS

73.6

0.82

1.1

81.25

Associated Gene:

Gene:

PGBD5

Ensembl Gene ID:

ENSAPLG00000001338

Chromosome:

PEDO01000233.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001358

25497 - 59538

34042