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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000233.1_85925_87701_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85925 - 87701

Intron Length:

1777

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

GGTTTTATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

CTGGTTTTATTT

Flanking Amino Acid:

WYLENVYPELRVPDHQDIAF

Intron Amino Acid Position:

413

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

78.7

31.6

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

77.1

0.61

0.9

74.7

Minor 5ss

39.8

-1.1

53.4

43.8

Minor BPS

48.4

-0

1.7

61.91

43.6

Associated Gene:

Gene:

GALNT2

Ensembl Gene ID:

ENSAPLG00000002130

Chromosome:

PEDO01000233.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002298

79681 - 119596

39916