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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_1002793_1002920_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1002793 - 1002920

Intron Length:

128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGTC

5'SS Class:

strong_major

3'SS Sequence:

GCTCCTCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAC

U12 Branch Point Sequence:

TGTGTGTTAACG

Flanking Amino Acid:

EAVCRYFYSKVQQRRQELEQ

Intron Amino Acid Position:

496

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.7

34.4

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

79.3

0.66

0.8

72.7

Minor 5ss

35.5

-1.7

3.5

49.2

47.3

Minor BPS

51.7

-0

2.2

63.23

44.8

Associated Gene:

Gene:

SMARCD1

Ensembl Gene ID:

ENSAPLG00000006874

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017413

1001066 - 1008030

6965

ENSAPLT00000007172

1001066 - 1008030

6965