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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_1004669_1004765_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1004669 - 1004765

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATGT

5'SS Class:

strong_major

3'SS Sequence:

TATTTTGTTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

ATTTTGTTTAAG

Flanking Amino Acid:

CTVLLMLDYQPPQFKLDPRL

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

81.6

33.2

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

75.2

0.57

1.1

79.5

37.9

Minor 5ss

39.7

-1.2

3.1

56.6

47.5

Minor BPS

45.1

-0.5

2.4

58.22

43.6

Associated Gene:

Gene:

SMARCD1

Ensembl Gene ID:

ENSAPLG00000006874

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017413

1001066 - 1008030

6965

ENSAPLT00000007172

1001066 - 1008030

6965