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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_1005336_1005817_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1005336 - 1005817

Intron Length:

482

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

GTGTTGCTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

CTCTCCTGACTC

Flanking Amino Acid:

LRVEGRLLEDSALSKYDATK

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

78.2

36.4

Major BPS

68.9

0.47

59.2

39.1

Major PPT

76.5

0.6

69.6

41.6

Minor 5ss

38.7

-1.3

3.4

53.8

43.6

Minor BPS

52.4

0.06

1.8

62.53

43.6

Associated Gene:

Gene:

SMARCD1

Ensembl Gene ID:

ENSAPLG00000006874

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017413

1001066 - 1008030

6965

ENSAPLT00000007172

1001066 - 1008030

6965