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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_1006369_1006466_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1006369 - 1006466

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTGCTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAC

U12 Branch Point Sequence:

GGGTTCTTGACT

Flanking Amino Acid:

KMADKILPQRIRELVPESQA

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

66.6

39.6

Major BPS

73.9

0.59

65.3

41.6

Major PPT

74.4

0.55

0.9

69.5

36.8

Minor 5ss

27.1

-2.6

26.2

36.9

Minor BPS

69.3

0.69

1.2

76.19

40.5

Associated Gene:

Gene:

SMARCD1

Ensembl Gene ID:

ENSAPLG00000006874

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017413

1001066 - 1008030

6965

ENSAPLT00000007172

1001066 - 1008030

6965