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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_1033099_1033975_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1033099 - 1033975

Intron Length:

877

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTCCCCTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTGCAG

U12 Branch Point Sequence:

CAGGCCTGAGCC

Flanking Amino Acid:

AGELLALLNNRYEIPDTQTA

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

74.9

35.3

Major BPS

-0.5

1.6

51.1

44.3

Major PPT

67.6

0.4

0.9

71.7

26.9

Minor 5ss

28.5

-2.5

3.4

40.8

45.6

Minor BPS

46.5

-0.2

1.8

52.26

44.8

Associated Gene:

Gene:

ASIC1

Ensembl Gene ID:

ENSAPLG00000006928

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007240

1029801 - 1034337

4537