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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_1050804_1051443_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1050804 - 1051443

Intron Length:

640

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTATGTTCA

5'SS Class:

major

3'SS Sequence:

TGTATCTCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAAAAAT

U12 Branch Point Sequence:

AATACTGTATCT

Flanking Amino Acid:

AVRLKRREKRRSSRQYIEGP

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

70.3

36.5

Major BPS

50.5

0.01

1.1

57.3

34.4

Major PPT

81.1

0.7

0.9

77.9

36.4

Minor 5ss

46.1

-0.4

2.4

50.4

Minor BPS

46.8

-0.1

2.2

68.15

42.7

Associated Gene:

Gene:

RACGAP1

Ensembl Gene ID:

ENSAPLG00000006988

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045125

1048374 - 1055032

6659

ENSAPLT00000025543

1047431 - 1056032

8602

ENSAPLT00000007292

1035010 - 1055032

20023

ENSAPLT00000046049

1037681 - 1055032

17352