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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_1051773_1051962_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1051773 - 1051962

Intron Length:

190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAGGTGTC

5'SS Class:

major

3'SS Sequence:

TTCTGTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCCAC

U12 Branch Point Sequence:

TGATTCCCACCT

Flanking Amino Acid:

PYSLRSQRKSGPLQPWNSDS

Intron Amino Acid Position:

275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

73.5

Major BPS

62.4

0.31

1.2

72.4

34.6

Major PPT

85.1

0.79

0.8

76.9

37.4

Minor 5ss

-1.6

3.6

48.3

42.5

Minor BPS

45.3

-0.2

2.1

66.5

43.7

Associated Gene:

Gene:

RACGAP1

Ensembl Gene ID:

ENSAPLG00000006988

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045125

1048374 - 1055032

6659

ENSAPLT00000025543

1047431 - 1056032

8602

ENSAPLT00000007292

1035010 - 1055032

20023

ENSAPLT00000046049

1037681 - 1055032

17352