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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_105783_105890_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105783 - 105890

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTCTT

5'SS Class:

major

3'SS Sequence:

CTCCTTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTGAA

U12 Branch Point Sequence:

AGAGACTGAACG

Flanking Amino Acid:

LAGDGVPVNISVTRTTVGTG

Intron Amino Acid Position:

517

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

75.1

40.8

Major BPS

56.6

0.16

1.2

49.3

Major PPT

0.79

0.7

79.9

25.5

Minor 5ss

43.1

-0.8

3.2

69.3

40.9

Minor BPS

46.9

-0.3

1.8

49.93

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019239

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035123

6338 - 106431

100094