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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_110889_111193_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
110889 - 111193

Intron Length:
305

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAA|GTAAGTCTG

5'SS Class:
strong_major

3'SS Sequence:
TTCCATCCTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTCCAT

U12 Branch Point Sequence:
TCAGCCTAGACC

Flanking Amino Acid:
VQSLAEDFKNKYEEEINKRT

Intron Amino Acid Position:
237

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84.6
0.81
0.9
75.5
40.6

Major BPS
77.3
0.68
1.2
86.7
32.3

Major PPT
79.6
0.67
0.8
73.5
31.2

Minor 5ss
39.5
-1.2
3
50.7
39.9

Minor BPS
52.1
0.05
1.8
61.99
44

Associated Gene:

Gene:
KRT75

Ensembl Gene ID:

Chromosome:
PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

109722 - 113473
3752