Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_111255_111372_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111255 - 111372

Intron Length:

118

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

AACTGCTTCATT

Flanking Amino Acid:

VENEFVILKKEVDGAYMNKT

Intron Amino Acid Position:

258

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

71.1

34.7

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

88.8

0.87

0.7

Minor 5ss

26.1

-2.7

3.2

42.6

Minor BPS

48.5

-0

2.2

66.95

44.3

Associated Gene:

Gene:

KRT75

Ensembl Gene ID:

ENSAPLG00000026114

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029707

109722 - 113473

3752