Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_111469_111744_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111469 - 111744

Intron Length:

276

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGCACA

5'SS Class:

major

3'SS Sequence:

GCTGCCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

ACTCACCCAAAT

Flanking Amino Acid:

INFLRALYEAELSQMQTQIS

Intron Amino Acid Position:

290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

65.7

40.1

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

73.2

0.52

0.9

65.6

Minor 5ss

41.9

-0.9

2.8

55.8

42.2

Minor BPS

42.3

-0.5

59.93

42.4

Associated Gene:

Gene:

KRT75

Ensembl Gene ID:

ENSAPLG00000026114

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029707

109722 - 113473

3752