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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_1133108_1134633_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1133108 - 1134633

Intron Length:

1526

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTACGGGCG

5'SS Class:

major

3'SS Sequence:

TCTTCTCCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

TGGTGCTGACAG

Flanking Amino Acid:

VEQLAHQHVRVTMESPHREA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.43

1.1

53.8

42.3

Major BPS

66.3

0.4

1.1

41.8

Major PPT

81.1

0.7

73.4

31.6

Minor 5ss

-2.5

3.6

29.8

43.2

Minor BPS

41.2

-0.8

2.1

46.17

45.9

Associated Gene:

Gene:

HDAC7

Ensembl Gene ID:

ENSAPLG00000007048

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030570

1109121 - 1145304

36184

ENSAPLT00000030418

1109121 - 1145304

36184

ENSAPLT00000007431

1073999 - 1145304

71306

ENSAPLT00000047615

1120631 - 1145304

24674

ENSAPLT00000037485

1109121 - 1145304

36184