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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_1136856_1137017_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1136856 - 1137017

Intron Length:

162

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

TTGTCCTCGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTCAC

U12 Branch Point Sequence:

TGGGACTCACCA

Flanking Amino Acid:

PPEHFPLRKTASEPNLKVRC

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

59.5

0.24

1.2

63.3

35.6

Major PPT

73.2

0.52

69.9

36.5

Minor 5ss

28.9

-2.4

3.3

37.6

47.1

Minor BPS

43.4

-0.5

53.22

44.7

Associated Gene:

Gene:

HDAC7

Ensembl Gene ID:

ENSAPLG00000007048

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030418

1109121 - 1145304

36184

ENSAPLT00000007431

1073999 - 1145304

71306

ENSAPLT00000047615

1120631 - 1145304

24674

ENSAPLT00000037485

1109121 - 1145304

36184

ENSAPLT00000030570

1109121 - 1145304

36184