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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_1137535_1137858_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1137535 - 1137858

Intron Length:

324

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCTCC

5'SS Class:

strong_major

3'SS Sequence:

GTGTTTGGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTGAT

U12 Branch Point Sequence:

GACTGATGGATT

Flanking Amino Acid:

LPAASGMAHEAPLAQRLMLQ

Intron Amino Acid Position:

258

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

71.9

34.5

Major BPS

65.8

0.39

1.2

57.3

41.7

Major PPT

70.6

0.46

1.1

65.2

45.5

Minor 5ss

39.7

-1.2

2.9

50.9

45.8

Minor BPS

41.2

-0.6

54.4

41.2

Associated Gene:

Gene:

HDAC7

Ensembl Gene ID:

ENSAPLG00000007048

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047615

1120631 - 1145304

24674

ENSAPLT00000030570

1109121 - 1145304

36184

ENSAPLT00000030418

1109121 - 1145304

36184

ENSAPLT00000007431

1073999 - 1145304

71306