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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_1137976_1138255_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1137976 - 1138255

Intron Length:

280

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGTAGC

5'SS Class:

major

3'SS Sequence:

CTCCTCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAT

U12 Branch Point Sequence:

AATTCTGTGATT

Flanking Amino Acid:

LGLPATTSARGDADRRPLSG

Intron Amino Acid Position:

297

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

67.1

44.6

Major BPS

68.9

0.47

1.2

60.7

45.9

Major PPT

79.2

0.66

0.7

73.1

25.2

Minor 5ss

34.2

-1.8

36.5

40.8

Minor BPS

53.5

0.19

73.5

37.9

Associated Gene:

Gene:

HDAC7

Ensembl Gene ID:

ENSAPLG00000007048

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030570

1109121 - 1145304

36184

ENSAPLT00000030418

1109121 - 1145304

36184

ENSAPLT00000007431

1073999 - 1145304

71306

ENSAPLT00000047615

1120631 - 1145304

24674