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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_1138809_1138967_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1138809 - 1138967

Intron Length:

159

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCCT

5'SS Class:

strong_major

3'SS Sequence:

CCTTGGGCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

GGGTGCTGACTT

Flanking Amino Acid:

RLKQQTHLGKRMAKTSEKPR

Intron Amino Acid Position:

433

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.9

76.1

39.5

Major BPS

66.3

0.4

1.1

41.8

Major PPT

68.9

0.43

40.2

Minor 5ss

33.4

-1.9

3.4

48.4

47.3

Minor BPS

43.8

-0.3

2.1

58.08

44.9

Associated Gene:

Gene:

HDAC7

Ensembl Gene ID:

ENSAPLG00000007048

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037485

1109121 - 1145304

36184

ENSAPLT00000030570

1109121 - 1145304

36184

ENSAPLT00000030418

1109121 - 1145304

36184

ENSAPLT00000007431

1073999 - 1145304

71306

ENSAPLT00000047615

1120631 - 1145304

24674