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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_1140634_1141070_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1140634 - 1141070

Intron Length:

437

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

CCGTGTCCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGGTCAC

U12 Branch Point Sequence:

TGTCCCGGAGCA

Flanking Amino Acid:

QERGLRSQCECLRGRKATLE

Intron Amino Acid Position:

621

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

72.2

39.5

Major BPS

-0

1.3

52.4

43.3

Major PPT

72.5

0.51

0.9

65.3

36.2

Minor 5ss

34.3

-1.8

2.9

44.2

Minor BPS

45.2

-0.3

2.3

63.02

42.6

Associated Gene:

Gene:

HDAC7

Ensembl Gene ID:

ENSAPLG00000007048

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037485

1109121 - 1145304

36184

ENSAPLT00000030570

1109121 - 1145304

36184

ENSAPLT00000030418

1109121 - 1145304

36184

ENSAPLT00000007431

1073999 - 1145304

71306

ENSAPLT00000047615

1120631 - 1145304

24674