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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_1142955_1143176_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1142955 - 1143176

Intron Length:

222

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGGGTC

5'SS Class:

major

3'SS Sequence:

TCCCTTTTCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAC

U12 Branch Point Sequence:

GGGTGTTGACCA

Flanking Amino Acid:

PGHHADPSTAMGFCFFNSVA

Intron Amino Acid Position:

732

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

69.4

35.2

Major BPS

71.3

0.53

1.1

63.1

44.5

Major PPT

83.1

0.74

0.7

79.1

26.4

Minor 5ss

30.8

-2.2

3.7

45.2

43.4

Minor BPS

42.2

-0.5

49.27

41.7

Associated Gene:

Gene:

HDAC7

Ensembl Gene ID:

ENSAPLG00000007048

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037485

1109121 - 1145304

36184

ENSAPLT00000030570

1109121 - 1145304

36184

ENSAPLT00000030418

1109121 - 1145304

36184

ENSAPLT00000007431

1073999 - 1145304

71306

ENSAPLT00000047615

1120631 - 1145304

24674