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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_1144777_1144969_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1144777 - 1144969

Intron Length:

193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGAGTGTC

5'SS Class:

major

3'SS Sequence:

CCTTCTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CTTCCCTGACGT

Flanking Amino Acid:

RSLEAVIQVQSKYWVAVQRF

Intron Amino Acid Position:

947

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

69.4

35.6

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

78.2

0.63

0.7

72.8

25.4

Minor 5ss

33.1

-1.9

3.3

40.1

Minor BPS

48.1

-0

2.1

70.08

46.5

Associated Gene:

Gene:

HDAC7

Ensembl Gene ID:

ENSAPLG00000007048

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007431

1073999 - 1145304

71306

ENSAPLT00000047615

1120631 - 1145304

24674

ENSAPLT00000037485

1109121 - 1145304

36184

ENSAPLT00000030570

1109121 - 1145304

36184

ENSAPLT00000030418

1109121 - 1145304

36184