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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_1176515_1185362_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1176515 - 1185362

Intron Length:

8848

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTACGCTGG

5'SS Class:

major

3'SS Sequence:

TCTGATCGAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

GCTGTCTGATCG

Flanking Amino Acid:

PATAAAGGLSGVLALWALIT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.2

52.1

47.3

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

63.6

0.31

1.1

58.9

41.5

Minor 5ss

42.7

-0.8

3.1

55.6

48.6

Minor BPS

45.2

-0.5

1.8

48.13

45.3

Associated Gene:

Gene:

SLC48A1

Ensembl Gene ID:

ENSAPLG00000031044

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035210

1174799 - 1185501

10703