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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_1201588_1206508_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1201588 - 1206508

Intron Length:

4921

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

TTTGGTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCAAAC

U12 Branch Point Sequence:

AGCCACCAAACC

Flanking Amino Acid:

SLPRIQGIRWTPLLDTESSL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

63.1

43.4

Major BPS

48.4

-0.1

52.9

28.9

Major PPT

85.3

0.79

0.9

76.9

42.1

Minor 5ss

26.2

-2.7

2.9

22.9

37.3

Minor BPS

41.4

-0.6

49.05

40.3

Associated Gene:

Gene:

RAPGEF3

Ensembl Gene ID:

ENSAPLG00000007186

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045002

1201246 - 1211854

10609

ENSAPLT00000036617

1201246 - 1211854

10609