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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_1208920_1209093_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1208920 - 1209093

Intron Length:

174

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGACAGCC

5'SS Class:

major

3'SS Sequence:

CCTCTGCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTAAT

U12 Branch Point Sequence:

CTTTCCCTAATG

Flanking Amino Acid:

SNQPAAARSSRYLVMAGTPE

Intron Amino Acid Position:

331

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

Major BPS

69.6

0.49

1.1

69.5

Major PPT

70.6

0.46

0.8

61.2

35.1

Minor 5ss

31.8

-2.1

3.3

42.5

44.5

Minor BPS

66.4

0.38

1.8

71.93

41.3

Associated Gene:

Gene:

RAPGEF3

Ensembl Gene ID:

ENSAPLG00000007186

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045002

1201246 - 1211854

10609

ENSAPLT00000036617

1201246 - 1211854

10609

ENSAPLT00000031885

1205144 - 1211854

6711