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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_1210698_1210767_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1210698 - 1210767

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGGGG

5'SS Class:

major

3'SS Sequence:

TGAACGCCCGCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

CCCTGCTGAAGA

Flanking Amino Acid:

SSCALRAQDKVPYEIYRPDH

Intron Amino Acid Position:

504

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

60.1

42.1

Major BPS

0.42

1.1

57.3

41.7

Major PPT

59.4

0.21

38.9

Minor 5ss

27.2

-2.6

3.7

37.3

47.4

Minor BPS

44.3

-0.4

2.1

51.11

46.7

Associated Gene:

Gene:

RAPGEF3

Ensembl Gene ID:

ENSAPLG00000007186

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045002

1201246 - 1211854

10609

ENSAPLT00000036617

1201246 - 1211854

10609

ENSAPLT00000031885

1205144 - 1211854

6711