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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_122701_122825_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

122701 - 122825

Intron Length:

125

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGTGT

5'SS Class:

strong_major

3'SS Sequence:

CTACTTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTCTAC

U12 Branch Point Sequence:

CACACTTCTACT

Flanking Amino Acid:

HSEIDSVRKQCTSLQTAITD

Intron Amino Acid Position:

349

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

70.6

42.2

Major BPS

51.6

0.04

1.3

53.8

41.6

Major PPT

82.2

0.73

0.8

76.7

31.6

Minor 5ss

37.4

-1.4

3.5

48.2

Minor BPS

45.2

-0.2

1.9

57.59

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025066

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027058

117839 - 124305

6467