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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_134860_135346_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

134860 - 135346

Intron Length:

487

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCCACGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

TTGCACTGCACT

Flanking Amino Acid:

AQEALETNKKMYEDECSQRI

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

34.4

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

78.7

0.65

0.8

74.3

29.6

Minor 5ss

-0.9

2.8

53.8

43.7

Minor BPS

47.7

-0.1

2.1

71.62

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004524

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041651

79637 - 137600

57964

ENSAPLT00000004640

133505 - 137600

4096