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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_135408_135672_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

135408 - 135672

Intron Length:

265

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

AACACGACTTCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAATGAA

U12 Branch Point Sequence:

CTCTCCTCAACA

Flanking Amino Acid:

AEKEFIALKKDADCFFLKKA

Intron Amino Acid Position:

301

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

38.4

Major BPS

67.7

0.44

38.9

Major PPT

58.8

0.2

52.1

41.7

Minor 5ss

33.3

-1.9

2.8

38.7

46.6

Minor BPS

70.1

0.63

1.6

75.44

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004524

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041651

79637 - 137600

57964

ENSAPLT00000004640

133505 - 137600

4096