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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_136184_136328_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

136184 - 136328

Intron Length:

145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

GGGGCTTTTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATAACAA

U12 Branch Point Sequence:

TTTTCTGAGACA

Flanking Amino Acid:

AEAEAWYKSKFEELRVTAGR

Intron Amino Acid Position:

388

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

82.1

24.6

Major BPS

0.08

61.4

34.3

Major PPT

0.36

44.4

Minor 5ss

27.3

-2.6

2.7

30.6

42.8

Minor BPS

49.8

-0

2.3

73.66

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004524

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041651

79637 - 137600

57964

ENSAPLT00000004640

133505 - 137600

4096