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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_136455_136781_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

136455 - 136781

Intron Length:

327

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCACG

5'SS Class:

strong_major

3'SS Sequence:

TTGCTTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTGAA

U12 Branch Point Sequence:

AGACACTGAAGA

Flanking Amino Acid:

NGEVRNAKDQRCKLETAVAN

Intron Amino Acid Position:

430

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.4

40.3

Major BPS

0.3

34.1

Major PPT

85.8

0.8

80.9

31.1

Minor 5ss

34.3

-1.8

2.8

40.4

45.5

Minor BPS

44.4

-0.4

1.8

51.62

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004524

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041651

79637 - 137600

57964

ENSAPLT00000004640

133505 - 137600

4096