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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_137316_137394_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

137316 - 137394

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTTGG

5'SS Class:

major

3'SS Sequence:

TTGCCTTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAG

U12 Branch Point Sequence:

CTAGGCTGAAAT

Flanking Amino Acid:

RAEEGLPVNISVCHSQRGLA

Intron Amino Acid Position:

515

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.1

43.9

Major BPS

59.4

0.23

1.5

69.4

37.7

Major PPT

81.1

0.7

0.8

31.6

Minor 5ss

42.5

-0.8

2.8

59.2

45.2

Minor BPS

45.7

-0.2

2.1

62.82

46.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004524

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004640

133505 - 137600

4096

ENSAPLT00000041651

79637 - 137600

57964