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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_144831_145347_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

144831 - 145347

Intron Length:

517

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TCTGCTCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTCT

U12 Branch Point Sequence:

TCTGCTCCAACA

Flanking Amino Acid:

YRKLLEGEESRLAGDGVGSV

Intron Amino Acid Position:

418

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

71.1

34.7

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

71.5

0.48

0.9

66.2

34.5

Minor 5ss

26.1

-2.7

3.2

42.6

Minor BPS

48.4

-0.1

63.87

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000589

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031476

143079 - 153529

10451

ENSAPLT00000004731

144072 - 174462

30391

ENSAPLT00000001244

143079 - 169608

26530