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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_147169_147627_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147169 - 147627

Intron Length:

459

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

ATGTAACTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTAATGTAACT

Flanking Amino Acid:

INFLRSLYEAELRELQSQIS

Intron Amino Acid Position:

248

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

76.2

34.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

60.9

0.25

1.1

52.1

46.4

Minor 5ss

41.9

-0.9

2.7

42.2

Minor BPS

54.2

0.21

2.2

81.56

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000589

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031476

143079 - 153529

10451

ENSAPLT00000004731

144072 - 174462

30391

ENSAPLT00000001244

143079 - 169608

26530