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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_147724_148136_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147724 - 148136

Intron Length:

413

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

TCTTTTTTTAAG

Flanking Amino Acid:

AENEFVVLKKDVDAAYMNKV

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.5

35.4

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

80.6

0.69

0.9

85.9

25.7

Minor 5ss

27.4

-2.6

3.2

35.6

41.2

Minor BPS

50.2

-0.1

1.8

59.36

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000589

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004731

144072 - 174462

30391

ENSAPLT00000001244

143079 - 169608

26530

ENSAPLT00000031476

143079 - 153529

10451