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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_148198_150763_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

148198 - 150763

Intron Length:

2566

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAATGTAT

5'SS Class:

major

3'SS Sequence:

TTTCTTCTGGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTTAA

U12 Branch Point Sequence:

TCTAACTTAACA

Flanking Amino Acid:

MQDLVEDFKSKYEDEINKRT

Intron Amino Acid Position:

195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.1

71.3

34.7

Major BPS

65.6

0.39

0.9

55.7

32.1

Major PPT

0.74

0.9

80.9

31.1

Minor 5ss

40.2

-1.1

3.4

55.7

43.1

Minor BPS

70.5

0.64

1.5

77.35

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000589

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004731

144072 - 174462

30391

ENSAPLT00000001244

143079 - 169608

26530

ENSAPLT00000031476

143079 - 153529

10451