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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_176186_178336_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

176186 - 178336

Intron Length:

2151

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAACG

5'SS Class:

strong_major

3'SS Sequence:

CTTTGCCATTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTGAT

U12 Branch Point Sequence:

TACTTGATATCT

Flanking Amino Acid:

MNLKKTIYEQELEELLTEIK

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

71.4

38.4

Major BPS

0.62

65.3

41.5

Major PPT

77.3

0.61

0.9

74.2

35.6

Minor 5ss

33.1

-1.9

2.9

41.1

44.9

Minor BPS

43.3

-0.4

2.4

65.28

45.2

Associated Gene:

Gene:

KRT80

Ensembl Gene ID:

ENSAPLG00000015884

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016565

165765 - 180115

14351