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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_179113_179208_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

179113 - 179208

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TTTGCAACACCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAA

U12 Branch Point Sequence:

TTTGCAACACCA

Flanking Amino Acid:

RSCIVSQKSQCLYLEENIKE

Intron Amino Acid Position:

329

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

73.2

37.5

Major BPS

65.8

0.39

1.4

77.7

37.1

Major PPT

0.36

57.6

42.2

Minor 5ss

37.5

-1.4

2.9

50.7

45.7

Minor BPS

41.9

-0.6

2.2

61.87

43.8

Associated Gene:

Gene:

KRT80

Ensembl Gene ID:

ENSAPLG00000015884

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016565

165765 - 180115

14351