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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_221852_222849_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

221852 - 222849

Intron Length:

998

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGGTGG

5'SS Class:

major

3'SS Sequence:

CCCTGTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAG

U12 Branch Point Sequence:

TCTTTCTTTCCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

55.7

43.7

Major BPS

72.5

0.56

1.5

71.7

44.6

Major PPT

71.2

0.48

0.9

64.3

36.7

Minor 5ss

42.4

-0.8

3.1

52.2

46.9

Minor BPS

44.2

-0.4

3.6

69.7

42.2

Associated Gene:

Gene:

FAIM2

Ensembl Gene ID:

ENSAPLG00000015532

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016211

206633 - 222994

16362