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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_227317_227408_R

Intron Information:

Intron Rank:

130207

Intron Class:

major

Intron Phase:

Intron Coordinates:

227317 - 227408

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGATGA

5'SS Class:

strong_major

3'SS Sequence:

AATTGCTCACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

CAACCTTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

70.4

36.4

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

61.4

0.26

53.2

41.8

Minor 5ss

43.4

-0.7

2.8

56.4

47.7

Minor BPS

65.2

0.56

1.3

71.35

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017259

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024250

224728 - 228175

3448