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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_227554_228008_R

Intron Information:

Intron Rank:

130208

Intron Class:

major

Intron Phase:

Intron Coordinates:

227554 - 228008

Intron Length:

455

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGATGG

5'SS Class:

strong_major

3'SS Sequence:

GTCTTTTCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTGAA

U12 Branch Point Sequence:

CTTGCTTGAAGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

68.5

39.2

Major BPS

56.9

0.17

1.3

51.3

44.2

Major PPT

85.3

0.79

0.8

79.9

32.3

Minor 5ss

31.9

-2.1

38.5

46.6

Minor BPS

49.5

-0

1.9

62.35

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017259

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024250

224728 - 228175

3448