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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_260080_260648_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

260080 - 260648

Intron Length:

569

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGGCAGCG

5'SS Class:

weak_major

3'SS Sequence:

ACAAACCCCAGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACAAAC

U12 Branch Point Sequence:

TCGTACAAACCC

Flanking Amino Acid:

LKDLANASRYGAHSFPSNTK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.7

0.04

1.2

41.3

Major BPS

59.6

0.24

65.2

28.2

Major PPT

-0.3

1.6

39.3

33.9

Minor 5ss

-2.4

3.5

29.9

43.2

Minor BPS

40.5

-0.7

2.2

51.67

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019104

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040331

259973 - 261630

1658