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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_268869_269463_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

268869 - 269463

Intron Length:

595

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

TTCACTCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

TCTTGTTTCACT

Flanking Amino Acid:

IVNRKEHRLKKGCGYHLDLF

Intron Amino Acid Position:

825

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

73.9

36.8

Major BPS

0.72

38.9

Major PPT

75.2

0.57

0.8

69.5

Minor 5ss

29.6

-2.3

3.5

41.1

45.6

Minor BPS

0.27

2.2

78.9

Associated Gene:

Gene:

SLC4A8

Ensembl Gene ID:

ENSAPLG00000013942

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020231

265286 - 277681

12396

ENSAPLT00000014615

265286 - 280522

15237