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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_271935_272806_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

271935 - 272806

Intron Length:

872

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGGAGG

5'SS Class:

major

3'SS Sequence:

TTTGTTTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTTAT

U12 Branch Point Sequence:

TTTGCTTTATTT

Flanking Amino Acid:

VFEKILYKFCKDYALSYLSL

Intron Amino Acid Position:

561

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

67.1

Major BPS

66.1

0.4

1.3

59.6

46.8

Major PPT

87.2

0.84

0.8

80.5

Minor 5ss

33.4

-1.9

3.2

40.1

Minor BPS

65.7

0.57

1.7

83.14

Associated Gene:

Gene:

SLC4A8

Ensembl Gene ID:

ENSAPLG00000013942

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020231

265286 - 277681

12396

ENSAPLT00000014615

265286 - 280522

15237