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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_274052_274497_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

274052 - 274497

Intron Length:

446

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGTGATGA

5'SS Class:

major

3'SS Sequence:

CTCCTGTCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTGCAC

U12 Branch Point Sequence:

TGGTTAGGACAT

Flanking Amino Acid:

RSMATLMTDEVFHDVAYKAK

Intron Amino Acid Position:

379

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

0.9

66.5

35.3

Major BPS

56.3

0.16

1.4

69.1

37.9

Major PPT

68.5

0.42

64.5

36.5

Minor 5ss

37.9

-1.4

47.3

48.1

Minor BPS

34.5

-1.1

2.2

51.48

42.5

Associated Gene:

Gene:

SLC4A8

Ensembl Gene ID:

ENSAPLG00000013942

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020231

265286 - 277681

12396

ENSAPLT00000014615

265286 - 280522

15237