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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_275374_275564_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

275374 - 275564

Intron Length:

191

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCTGCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TCTTTCTGATTG

Flanking Amino Acid:

QPDLHPLDKPAQTLTPHTPP

Intron Amino Acid Position:

267

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.6

33.8

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

82.9

0.74

0.9

77.7

36.7

Minor 5ss

26.4

-2.7

3.5

38.5

46.7

Minor BPS

50.8

-0.1

1.8

59.31

43.2

Associated Gene:

Gene:

SLC4A8

Ensembl Gene ID:

ENSAPLG00000013942

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020231

265286 - 277681

12396

ENSAPLT00000014615

265286 - 280522

15237